SWAT4LS 2018
Semantic Web Applications and Tools for Health Care and Life Sciences

Table of Contents

• Preface
  
  

Long papers

• Using semantic technologies to enhance metadata submissions to public repositories in biomedicine.
  Attila L. Egyedi, Martin J. O’Connor, Marcos Martínez-Romero, Debra Willrett,, Josef Hardi, John Graybeal, Mark A. Musen
• The Story of an experiment: a provenance-based semantic approach towards research reproducibility
  Sheeba Samuel, Kathrin Groeneveld, Frank Taubert, Daniel Walther, Tom Kache, Teresa Langenstück, Birgitta König-Ries, H. Martin Bücker, Christoph Biskup
• DSAP: Data Sharing Agreement Privacy Ontology.
  Mingyuan Li, Reza Samavi
• A model for capturing provenance of assertions about chemical substances
  Kody Moodley, Amrapali Zaveri, Chunlei Wu, Michel Dumontier
• Design of a framework to support reuse of Open Data about agriculture
  Alec Gordon, Mohammad Sadnan Al Manir, Brandon Smith, Amir Hossein Rezaie, Christopher Baker
• Ontology-driven metadata enrichment for genomic datasets
  Anna Bernasconi, Arif Canakoglu, Andrea Colombo, Stefano Ceri
• Sparklis over PEGASE knowledge graph: a new tool for pharmacovigilance
  Carlos Bobed, Laura Douze, Sébastien Ferré, Romaric Marcilly
• A distributed analytics platform to execute FHIR based phenotyping algorithms
  Md. Rezaul Karim, Binh-Phi Nguyen, Lukas Zimmermann, Toralf Kirsten, Matthias Löbe, Frank Meineke, Holger Stenzhorn, Oliver Kohlbacher, Stefan Decker, Oya Beyan
• A semantic data integration methodology for translational neurodegenerative disease research
  Sumit Madan, Maksims Fiosins, Stefan Bonn, Juliane Fluck
• Cooperation of bio-ontologies for the classification of genetic intellectual disabilities : a diseasome approach.
  Gabin Personeni, Marie-Dominique Devignes, Malika Smail-Tabbone, Philippe Jonveaux, Céline Bonnet, Adrien Coulet
• Evaluation of knowledge graph embedding approaches for drug-drug interaction prediction using Linked Open Data
  Remzi Çelebi, Erkan Yaşar, Hüseyin Uyar, Özgür Gümüş, Oguz Dikenelli, Michel Dumontier
• Vec2SPARQL: integrating SPARQL queries and knowledge graph embeddings
  Maxat Kulmanov, Senay Kafkas, Andreas Karwath, Alexander Malic, Georgios V Gkoutos, Michel Dumontier, Robert Hoehndorf
• Data2Services: enabling automated conversion of data to services
  Vincent Emonet, Amrapali Zaveri, Alexander Malic Andreea Grigoriu Michel Dumontier
• Getting the best of Linked Data and Property Graphs: rdf2neo and the KnetMiner use case
  Marco Brandizi, Ajit Singh, Keywan Hassani-Pak

Short papers

• Wikidata as an intuitive resource towards semantic data modeling in data FAIRification
  Annika Jacobsen, Andra Waagmeester, Rajaram Kaliyaperumal, Greg Stupp, Lynn Schriml, Mark Thompson, Andrew I. Su, Marco Roos
• Increasing the nanopublication recall with a BridgeDb identifier mapping service
  Egon Willighagen