| Vol-1309 urn:nbn:de:0074-1309-5 Copyright © 2014 for the individual papers by the papers' authors. Copying permitted for private and academic purposes. This volume is published and copyrighted by its editors.

# ICBO-WS 2014
DIKR 2014 / IWOOD 2014 / OBIB 2014 - Workshops of ICBO 2014

- The First International Workshop on Drug Interaction Knowledge Representation (DIKR 2014)
- The Second International Workshop on Definitions in Ontologies (IWOOD 2014)
- The Starting an OBI-based Biobank Ontology Workshop (OBIB 2014)

### Joint Proceedings of The First International Workshop on Drug Interaction Knowledge Representation (DIKR 2014), The Second International Workshop on Definitions in Ontologies (IWOOD 2014), and The Starting an OBI-based Biobank Ontology Workshop (OBIB 2014)
co-located with 5th International Conference on Biomedical Ontologies (ICBO2014)

### Houston, TX, USA, October 6-7, 2014.

Edited by

#### DIKR 2014 Chairs

#### Richard D. Boyce *
Mathias Brochhausen **
Philip E. Empey *
William R. Hogan ***
Daniel C. Malone ****

* University of Pittsburgh, Pittsburgh, PA, USA
** University of Arkansas for Medical Sciences, Little Rock, AR, USA
*** University of Florida, Gainesville, FL, USA
**** University of Arizona, Tucson, AZ, USA

#### IWOOD 2014 Chairs

#### Patrick Ray *
Alan Ruttenberg *
Selja Seppälä *

* University at Buffalo, Buffalo, NY, USA

#### OBIB 2014 Chairs

#### Mathias Brochhausen *
Melissa Haendel **
Christian J. Stoeckert ***
Jie Zheng ***

* University of Arkansas for Medical Sciences, Little Rock, AR, USA
** Oregon Health Science University, Portland, OR, USA
*** University of Pennsylvania, Philadelphia, PA, USA

## Table of Contents

- Frontmatter, Preface & Contents

### The First International Workshop on Drug Interaction Knowledge Representation (DIKR 2014)

- DIKR 2014 Frontmatter & Preface
- Redesign of a clinical decision support system for a drug - drug interaction alert 4-15
  Daniel Luna, Carlos Otero, Fernan Gonzalez Bernaldo de Quiros
- Towards a foundational representation of potential drug-drug interaction knowledge 16-31
  Mathias Brochhausen, Jodi Schneider, Daniel Malone, Philip E. Empey, William R. Hogan, Richard D. Boyce

### The Second International Workshop on Definitions in Ontologies (IWOOD 2014)

- IWOOD 2014 Frontmatter & Preface
- Textual and logical definitions in ontologies 35-41
  Selja Seppälä, Yonatan Schreiber, Alan Ruttenberg
- Defining 'sign' and 'symptom' 42-48
  Alexander P. Cox, Patrick L. Ray, Mark Jensen, Alexander D. Diehl
- An alternative terminology for pain assessment 49-54
  Werner Ceusters

### The Starting an OBI-based Biobank Ontology Workshop (OBIB 2014)

- OBIB 2014 Frontmatter & Preface
- Penn Medicine biobank informatics 57-60
  Heather Williams, David Birtwell
- Towards a common semantic representation of informed consent for biobank specimens 61-63
  Frank J. Manion, Yongqun He, Elizabeth Eisenhauer, Yu Lin, Alla Karnovsky, Marcelline R. Harris
- A specimen-based view of the world: Using the Biological Collections Ontology to query biodiversity data 64-66
  Ramona Walls, Robert Guralnick, John Deck, Andréa Matsunaga

#### Complete Proceedings available as PDF

2014-12-12: submitted by Mathias Brochhausen, metadata incl. bibliographic data published under Creative Commons CC0
2014-12-13: published on CEUR-WS.org |valid HTML5|