| Vol-993 urn:nbn:de:0074-993-2 Copyright © 2013 for the individual papers by the papers' authors. Copying permitted only for private and academic purposes. This volume is published and copyrighted by its editors.

# IWSG 2013
International Workshop on Science Gateways

### Proceedings of the 5th International Workshop on Science Gateways

### Zurich, Switzerland, 3-5 June, 2013.

Edited by

### Tamas Kiss *

* University of Westminster, Center for Parallel Computing, London, UK

## Table of Contents

- Preface
- Organisation

### Regular papers

1. VisIVO Science Gateway: a Collaborative Environment for the Astrophysics Community
   Eva Sciacca, Marilena Bandieramonte, Ugo Becciani, Alessandro Costa, Mel Krokos, Piero Massimino, Catia Petta, Costantino Pistagna, Simone Riggi, Fabio Vitello
2. Scaling Bio-Analyses from Computational Clusters to Grids
   Heorhiy Byelas, Martijn Dijkstra, Pieter Neerincx, Freerk van Dijk, Alexandros Kanterakis, Patrick Deelen, Morris Swertz
3. Orbital analysis of Oxo and Peroxo Dicopper Complexes via Quantum Chemical Workflows in MoSGrid
   Sonja Herres-Pawlis, Alexander Hoffmann, Richard Grunzke, Lars Packschies
4. Bringing Scientific Workflow to the Masses via Pegasus and HUBzero
   Michael McLennan, Steven Clark, Frank McKenna, Ewa Deelman, Mats Rynge, Karan Vahi, Derrick Kearney, Carol Song
5. A GEANT4 Web-based Application to Support Intra-Operative Electron Radio-Therapy using the European Grid Infrastructure
   Carlo Casarino, Giorgio Russo, Giuliana Carmela, Giuseppe La Rocca, Roberto Barbera, Giovanni Borasi, Cristina Messa, Maria Carla Gilardi, Gianluca Passaro
6. ICAT Job Portal: a generic job submission system built on a scientific data catalog
   Stephen M Fisher, Kevin Phipps, Daniel J Rolfe
7. EU-Brazil Open Data and Cloud Computing e-Infrastructure for Biodiversity
   Rafael Amaral, Rosa Badia, Ignacio Blanquer, Leonardo Candela, Donatella Castelli, Renato de Giovanni, William A. Gray, Andrew Jones, Daniele Lezzi, Pasquale Pagano, Vanderlei Perez-Canhos, Francisco Quevedo, Roger Rafanell, Vinod Rebello, Erik Torres
8. Rapid Prototyping of Science Gateways in the Brazilian National HPC Network
   Bruno F. Bastos, Vinicius M. Moreira, Antonio Tadeu A. Gomes
9. From the Desktop to the Grid: conversion of KNIME Workflows to gUSE
   Luis de la Garza, Jens Krüger, Charlotta Schärfe, Marc Röttig, Stephan Aiche, Knut Reinert, Oliver Kohlbacher
10. Introducing The Neuroscience Gateway
    Subhashini Sivagnanam, Amit Majumdar, Kenneth Yoshimoto, Vadim Astakhov, Anita Bandrowski, Mary Ann Martone, Nicholas T. Carnevale
11. The Urban Research Gateway for Australia: Development of a Federated, Multi-disciplinary Research e-Infrastructure
    Richard. O. Sinnott, Christopher Bayliss, Andrew Bromage, Gerson Galang, Guido Grazioli, Philip Greenwood, Angus Macauley, Damien Mannix, Luca Morandini, Marcos Nino-Ruiz, Christopher Pettit, Martin Tomko, Muhammad Sarwar, Robert Stimson, William Voorsluys, Ivo Widjaja
12. A Data-Centric Science Gateway for Computational Neuroscience
    Shayan Shahand, Ammar Benabdelkader, Jordi Huguet, Mahdi Jaghouri, Mark Santcroos, Mostapha al Mourabit, Paul F.C. Groot, Matthan W.A. Caan, Antoine H.C. van Kampen, Silvia D. Olabarriaga
13. Data Bridge: solving diverse Data Access in Scientific Applications
    Zoltan Farkas, Peter Kacsuk, Akos Balasko, Krisztian Karoczkai, Marc Santcroos, Silvia Olabarriaga
14. User-Friendly Workflows in Quantum Chemistry
    Sonja Herres-Pawlis, Alexander Hoffmann, Sandra Gesing, Jens Krüger, Akos Balasko, Peter Kacsuk, Richard Grunzke, Georg Birkenheuer, Lars Packschies
15. A Model-based Information Security Risk Assessment Method for Science Gateways
    Evert Mouw, Guido van 't Noordende, Baas Louter, Silvia Delgado Olabarriaga
16. Recipes 2.0: Building for Today and Tomorrow
    Rion Dooley, Matthew R. Hanlon
17. On the Equivalence of Specific Control Flow and Data Flow Patterns with Use Cases
    Akos Balasko, Peter Kacsuk
18. Improving the Swiss Grid Proteomics Portal: Requirements and new Features based on Experience and Usability Considerations
    Peter Kunszt, Lorenz Blum, Bela Hullar, Emanuel Schmid, Adam Srebniak, Witold Wolski, Bernd Rinn, Franz-Josef Elmer, Chandrasekhar Ramakrishnan, Andreas Quandt, Lars Malmström

03-Jun-2013: submitted by Tamas Kiss, Noam Weingarten
03-Jun-2013: published on CEUR-WS.org